Molecular Model Library
ODYSSEY's Molecular Model Library provides hundreds of pre-constructed samples of matter spanning a wide range of systems. Each entry allows for query of system properties, visualisation in multiple model styles, and molecular simulation. The models can be used as the entry to a classroom demonstration or as starting content for new lab activities.
In addition to all these molecular models. Any of the 27000 molecules in the RCSB's Protein Data Bank can be downloaded as a PDB file and displayed in Odyssey.
Biopolymers |
| Amylose |
| Cellulose |
| Cobratoxin |
| Collagen |
| Crambin |
| DNA Strand |
| Endothelin |
| Gramicidin S |
| Hemoglobin |
| Insulin |
| Messenger RNA |
| Phospholipase Inhibitor |
| Ricin |
| Superoxide Dismutase |
| Thioredoxin |
| Triose Phosphate Isomerase |
| Trp Cage Miniprotein |
| Vasopressin |
| |
Inorganic |
| a-Quartz |
| Aluminum |
| Ammonia |
| Argon |
| Bromine |
| Calcium Fluoride |
| Calcium |
| Carbon Disulfide |
| Carbon Oxides |
| Carbon Tetrachloride |
| Carbon |
| Carbonic Acid |
| Carbonic Acid |
| Cesium Chloride |
| Chlorine Fluoride |
| Chlorine Oxides |
| Chlorine Oxoacids |
| Chlorine |
| Chromium Complexes |
| Chromium |
| Close Packing |
| Cobalt Complexes |
| Copper Complexes |
| Copper |
| Diborane |
| Endohedral Fullerenes |
| Fluorine |
|
Inorganic |
| Gold |
| Helium |
| Hydrazine |
| Hydrogen Bromide |
| Hydrogen Chloride |
| Hydrogen Cyanide |
| Hydrogen Fluoride |
| Hydrogen Iodide |
| Hydrogen Peroxide |
| Hydrogen Sulfide |
| Hydrogen |
| Hypohalous Acids |
| Iodine Pentafluoride |
| Iodine |
| Iron Complexes |
| Iron |
| Krypton |
| Lattice Types |
| Lead Tetrachloride |
| Lithium |
| Manganese Complexes |
| Neon |
| Nickel Complexes |
| Nickel Tetracarbonyl |
| Nitric Acid |
| Nitrogen Oxides |
| Nitrogen Trichloride |
| Nitrogen |
| Oxygen |
| Palladium Complexes |
| Phosgene |
| Phosphine |
| Phosphoric Acid |
| Phosphorus Halides |
| Phosphorus Oxides |
| Phosphorus |
| Oxychloride |
| Phosphorus |
| Platinum Complexes |
| Polonium |
| Potassium Fluoride |
| Potassium |
| Ruthenium Complexes |
| Silicon |
| Silver |
| Sodium Chloride |
| Sodium |
| Strong Acids |
| Sulfur Halides |
| Sulfur Oxides |
| |
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Inorganic |
| Sulfur |
| Sulfuric Acid |
| Tetrachlorosilane |
| Titanium Complexes |
| Titanium Tetrachloride |
| Uranium Hexafluoride |
| Vanadium Complexes |
| Water |
| Xenon |
| Zinc Complexes |
| Zinc Sulfide |
| |
Interfaces |
| 1-Octanol-Water |
| CCl4-Water |
| Carbon Disulfide-Water |
| DMF-n-Pentane |
| NaCl-Water |
| NaCl-Water |
| n-Pentane-Water |
| |
Mixtures |
| Air |
| DMSO+Water |
| Ethanol+Water |
| Jovian Atmosphere |
| Martian Atmosphere |
| Methanol+Acetamide |
| Methanol+Water |
| Natural Gas |
| SF6+N2+He |
| Syngas |
| Titan Atmosphere |
| UF6+H2 |
| Venus Atmosphere |
| With Acetone |
| With CCl4 |
| With Carbon Disulfide |
| With DMF |
| With Water |
| With n-Pentane |
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Organic |
| 1,2-Dichloroethylene |
| p-Orbitals |
| AMP, ADP, ATP |
| Acetylene |
| Alcohol |
| Aldehydes |
| |
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Organic |
| Alkanes, Branched |
| Alkanes, Linear |
| Alkenes |
| Alkyl Halides |
| Alkylbenzenes |
| Amides |
| Amines |
| Amino Acids |
| Amino Acids |
| Artificial Sweeteners |
| Bases for Nucleic Acids |
| Benzene |
| Carboxylic Acids |
| Catenane |
| Chlorinated Acetic Acid |
| Cycloalkanes |
| Dienes |
| Disaccharides |
| EDTA |
| Esters |
| Ethers |
| Ethylene Glycol |
| Explosives |
| Freons |
| Fuel Additives |
| Glycerol |
| Heterocycles |
| Inhalation Anesthetics |
| Ketones |
| Monosaccharides |
| Nitriles |
| Nitrobenzene |
| Nucleosides |
| Nucleotides |
| Oleic Acid |
| Pain Medications |
| Phenol |
| Phosphines |
| Polycyclic Alkanes |
| Polycyclic Aromatics |
| Polyenes |
| Sodium Stearate |
| Solvents I |
| Solvents II |
| Spirocyclic Alkanes |
| Steroids |
| Styrene |
| Sulfoxides |
| TMS |
| Thiols |
| |
| Vitamins |
| |
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Polymers |
| Kevlar |
| Nylon |
| PETE |
| PVC |
| Plexiglas |
| Polyethylene |
| Polypropylene |
| Polystyrene |
| Superglue |
| Teflon |
| |
Solutions |
| AMP in Water |
| Alkaline Earth Ions in Water |
| Alkaline Ions in Water |
| Aluminum Sulfate in Water |
| Amino Acids in Water |
| Benzoyl Peroxide in Acetonitrile |
| Bicarbonate in Water |
| CO2 in Water |
| Caffeine in CO2 |
| Cholesterol in Chloroform |
| Cr Complex in Water |
| Folic Acid in Ethanol |
| Halide Ions in Water |
| KMnO4 in Water |
| Mg EDTA in Water |
| Monosaccharides in Water |
| NH4ClO4 in Water |
| NaCl in Water |
| Physiological Saline Solution |
| Seawater |
| Soap Solution |
| Sodium Phosphate in Water |
| Sucrose in Water |
| Superglue Solution |
| Thiocyanate in Water |
| Thiosulfate in Water |
| Transition Metal Ions in Water |
| Vasopressin in Water |
| Water Softener |
| Zinc Nitrate in Water |
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